Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ybx1P62960 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.01□□□□□ -0.65
Ybx1P62960 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.01□□□□□ -0.65
Ybx1P62960 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ybx1P62960 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ybx1P62960 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ybx1P62960 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Gm7642-201ENSMUST00000216345 1809 ntBASIC11□□□□□ -0.65
Ybx1P62960 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ybx1P62960 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11□□□□□ -0.65
Ybx1P62960 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Ybx1P62960 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Gm23604-201ENSMUST00000104311 132 ntBASIC11□□□□□ -0.65
Ybx1P62960 Gm15815-201ENSMUST00000120569 255 ntBASIC11□□□□□ -0.65
Ybx1P62960 Gm15746-201ENSMUST00000120684 1027 ntBASIC11□□□□□ -0.65
Ybx1P62960 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11□□□□□ -0.65
Ybx1P62960 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC11□□□□□ -0.65
Ybx1P62960 Gm6686-201ENSMUST00000178455 258 ntBASIC11□□□□□ -0.65
Ybx1P62960 Gm5274-201ENSMUST00000182641 1003 ntBASIC11□□□□□ -0.65
Ybx1P62960 Gm4960-201ENSMUST00000182928 1001 ntBASIC11□□□□□ -0.65
Ybx1P62960 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11□□□□□ -0.65
Ybx1P62960 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11□□□□□ -0.65
Ybx1P62960 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11□□□□□ -0.65
Ybx1P62960 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 AC140314.1-201ENSMUST00000219549 554 ntBASIC11□□□□□ -0.65
Ybx1P62960 AC133517.1-201ENSMUST00000225825 594 ntBASIC11□□□□□ -0.65
Ybx1P62960 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Ybx1P62960 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Ybx1P62960 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11□□□□□ -0.65
Ybx1P62960 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ybx1P62960 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ybx1P62960 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11□□□□□ -0.65
Ybx1P62960 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11□□□□□ -0.65
Ybx1P62960 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ybx1P62960 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.99□□□□□ -0.65
Ybx1P62960 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ybx1P62960 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Ybx1P62960 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Ybx1P62960 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ybx1P62960 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Ybx1P62960 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC10.99□□□□□ -0.65
Ybx1P62960 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.99□□□□□ -0.65
Ybx1P62960 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC10.99□□□□□ -0.65
Ybx1P62960 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.99□□□□□ -0.65
Ybx1P62960 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.99□□□□□ -0.65
Ybx1P62960 Gm26174-201ENSMUST00000158415 219 ntBASIC10.99□□□□□ -0.65
Ybx1P62960 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms