Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm13888-201ENSMUST00000119148 422 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm6P62313 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm13182-201ENSMUST00000122241 312 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.42□□□□□ -0.9
Lsm6P62313 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.42□□□□□ -0.9
Lsm6P62313 Mir6407-201ENSMUST00000184510 101 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm6P62313 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm7525-201ENSMUST00000219425 454 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm19009-201ENSMUST00000223072 823 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 AC164429.1-201ENSMUST00000224210 518 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Lsm6P62313 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm6P62313 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.42□□□□□ -0.9
Lsm6P62313 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Lsm6P62313 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Lsm6P62313 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.41□□□□□ -0.9
Lsm6P62313 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm16030-201ENSMUST00000159098 603 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.41□□□□□ -0.9
Lsm6P62313 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 Gm3017-201ENSMUST00000203603 1126 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 Gm5881-201ENSMUST00000204737 367 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC9.41□□□□□ -0.9
Lsm6P62313 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC9.41□□□□□ -0.9
Lsm6P62313 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm8255-201ENSMUST00000218693 305 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 AC124581.2-201ENSMUST00000225459 282 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Lsm6P62313 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Lsm6P62313 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Lsm6P62313 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.41□□□□□ -0.9
Lsm6P62313 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Lsm6P62313 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Lsm6P62313 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms