Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cd28P31041 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Cd28P31041 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Cd28P31041 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Cd28P31041 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC9.35□□□□□ -0.91
Cd28P31041 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.35□□□□□ -0.91
Cd28P31041 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Csf2rb2-201ENSMUST00000096356 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.35□□□□□ -0.91
Cd28P31041 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.35□□□□□ -0.91
Cd28P31041 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Cd28P31041 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Gm22711-201ENSMUST00000116890 133 ntBASIC9.35□□□□□ -0.91
Cd28P31041 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.35□□□□□ -0.91
Cd28P31041 Gm16518-201ENSMUST00000117960 508 ntBASIC9.35□□□□□ -0.91
Cd28P31041 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.35□□□□□ -0.91
Cd28P31041 Gm15554-201ENSMUST00000120406 913 ntBASIC9.35□□□□□ -0.91
Cd28P31041 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.35□□□□□ -0.91
Cd28P31041 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.35□□□□□ -0.91
Cd28P31041 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.35□□□□□ -0.91
Cd28P31041 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.35□□□□□ -0.91
Cd28P31041 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Snord55-201ENSMUST00000174939 79 ntBASIC9.35□□□□□ -0.91
Cd28P31041 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.35□□□□□ -0.91
Cd28P31041 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.35□□□□□ -0.91
Cd28P31041 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Cd28P31041 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.35□□□□□ -0.91
Cd28P31041 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Cd28P31041 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.35□□□□□ -0.91
Cd28P31041 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC9.35□□□□□ -0.91
Cd28P31041 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Npnt-205ENSMUST00000117456 3383 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Tmem63c-203ENSMUST00000146292 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Cd28P31041 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cd28P31041 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.34□□□□□ -0.91
Cd28P31041 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cd28P31041 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 AC090962.2-201ENSMUST00000225064 1801 ntBASIC9.34□□□□□ -0.91
Cd28P31041 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Gm11411-201ENSMUST00000117951 719 ntBASIC9.34□□□□□ -0.91
Cd28P31041 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC9.34□□□□□ -0.91
Cd28P31041 Gm14208-201ENSMUST00000119645 678 ntBASIC9.34□□□□□ -0.91
Cd28P31041 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.34□□□□□ -0.91
Cd28P31041 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.34□□□□□ -0.91
Cd28P31041 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cd28P31041 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.34□□□□□ -0.91
Cd28P31041 Gm40414-201ENSMUST00000197608 481 ntBASIC9.34□□□□□ -0.91
Cd28P31041 Gm44323-201ENSMUST00000198689 129 ntBASIC9.34□□□□□ -0.91
Cd28P31041 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.34□□□□□ -0.91
Cd28P31041 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Cd28P31041 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cd28P31041 Fkbp15-201ENSMUST00000084527 4264 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Cd28P31041 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Kat7-204ENSMUST00000107733 3470 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Tle3-217ENSMUST00000162973 4114 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cd28P31041 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cd28P31041 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms