Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm18463-201ENSMUST00000207258 474 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 Gm18460-201ENSMUST00000208088 464 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pde6aP27664 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Gm25517-201ENSMUST00000083865 134 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6aP27664 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6aP27664 Gm45719-201ENSMUST00000207954 1662 ntBASIC12.41□□□□□ -0.42
Pde6aP27664 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6aP27664 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Pde6aP27664 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Gm22146-201ENSMUST00000157397 288 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Gm37723-201ENSMUST00000194480 565 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Gm7959-201ENSMUST00000221823 1078 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Gm25514-201ENSMUST00000083860 135 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pde6aP27664 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.4□□□□□ -0.42
Pde6aP27664 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pde6aP27664 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6aP27664 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC12.4□□□□□ -0.43
Pde6aP27664 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pde6aP27664 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Gm37242-201ENSMUST00000191873 2085 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Pde6aP27664 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pde6aP27664 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Gm12947-201ENSMUST00000116114 420 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Gm12397-201ENSMUST00000117674 615 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.39□□□□□ -0.43
Pde6aP27664 Gm26272-201ENSMUST00000179241 132 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Gm44304-201ENSMUST00000200509 145 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6aP27664 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC12.39□□□□□ -0.43
Pde6aP27664 AC157650.1-201ENSMUST00000224582 610 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 CT573086.4-201ENSMUST00000226729 342 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.39□□□□□ -0.43
Pde6aP27664 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pde6aP27664 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.39□□□□□ -0.43
Pde6aP27664 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pde6aP27664 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms