Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Fv4P11370 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Gm8918-201ENSMUST00000190587 1087 ntBASIC10.32□□□□□ -0.76
Fv4P11370 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.32□□□□□ -0.76
Fv4P11370 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.32□□□□□ -0.76
Fv4P11370 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Fv4P11370 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.32□□□□□ -0.76
Fv4P11370 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Fv4P11370 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.32□□□□□ -0.76
Fv4P11370 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Fv4P11370 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.32□□□□□ -0.76
Fv4P11370 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Gm37567-201ENSMUST00000193241 2279 ntBASIC10.32□□□□□ -0.76
Fv4P11370 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Fv4P11370 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.32□□□□□ -0.76
Fv4P11370 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Fv4P11370 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Fv4P11370 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Fv4P11370 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Fv4P11370 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Gm24398-201ENSMUST00000157870 109 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Gm17877-201ENSMUST00000192578 814 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Gm43811-201ENSMUST00000202862 695 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.31□□□□□ -0.76
Fv4P11370 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.31□□□□□ -0.76
Fv4P11370 AC154680.1-201ENSMUST00000224376 859 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Fv4P11370 Gm23680-201ENSMUST00000083162 164 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.31□□□□□ -0.76
Fv4P11370 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Fv4P11370 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Fv4P11370 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Fv4P11370 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.3□□□□□ -0.76
Fv4P11370 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.3□□□□□ -0.76
Fv4P11370 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Fv4P11370 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Fv4P11370 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Fv4P11370 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.3□□□□□ -0.76
Fv4P11370 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Fv4P11370 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.3□□□□□ -0.76
Fv4P11370 Gm1848-201ENSMUST00000120711 789 ntBASIC10.3□□□□□ -0.76
Fv4P11370 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.3□□□□□ -0.76
Fv4P11370 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.3□□□□□ -0.76
Fv4P11370 Gm16570-201ENSMUST00000161951 436 ntBASIC10.3□□□□□ -0.76
Fv4P11370 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Fv4P11370 Gm44329-201ENSMUST00000197469 112 ntBASIC10.3□□□□□ -0.76
Fv4P11370 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.3□□□□□ -0.76
Fv4P11370 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms