Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 AU040320-203ENSMUST00000102608 4073 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm45768-201ENSMUST00000206763 3202 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Myrf-205ENSMUST00000189897 3339 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Arnt2-207ENSMUST00000208232 6047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm23949-201ENSMUST00000104027 127 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm11411-201ENSMUST00000117951 719 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Gm12579-201ENSMUST00000118040 783 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Gm14724-201ENSMUST00000118400 537 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Gm15711-201ENSMUST00000118889 535 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Gm12337-201ENSMUST00000119634 400 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm18734-201ENSMUST00000172937 808 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm29067-201ENSMUST00000190821 470 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC8.2□□□□□ -1.1
Ccl1P10146 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC8.2□□□□□ -1.1
Ccl1P10146 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC8.2□□□□□ -1.1
Ccl1P10146 AC122024.3-201ENSMUST00000217719 294 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Gm9368-201ENSMUST00000219348 831 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Rassf8-202ENSMUST00000058538 1131 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm10288-201ENSMUST00000084614 537 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm21811-201ENSMUST00000096485 930 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 9130221F21Rik-201ENSMUST00000206867 2631 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm13127-201ENSMUST00000118978 1389 ntBASIC8.2□□□□□ -1.1
Ccl1P10146 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Ccl1P10146 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Ccl1P10146 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Ascc2-201ENSMUST00000070257 2650 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
Ccl1P10146 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Fgf6-201ENSMUST00000000187 4657 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
Ccl1P10146 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Ccl1P10146 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms