Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
UbbP0CG49 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm8737-201ENSMUST00000122208 642 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
UbbP0CG49 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Snord55-201ENSMUST00000174939 79 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Gm37246-201ENSMUST00000192665 835 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
UbbP0CG49 Ginm1-202ENSMUST00000065124 300 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Btrc-206ENSMUST00000224102 3037 ntBASIC9.29□□□□□ -0.92
UbbP0CG49 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
UbbP0CG49 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
UbbP0CG49 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
UbbP0CG49 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
UbbP0CG49 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
UbbP0CG49 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.28□□□□□ -0.92
UbbP0CG49 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
UbbP0CG49 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
UbbP0CG49 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.28□□□□□ -0.92
UbbP0CG49 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
UbbP0CG49 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
UbbP0CG49 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.28□□□□□ -0.92
UbbP0CG49 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.28□□□□□ -0.92
UbbP0CG49 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.28□□□□□ -0.92
UbbP0CG49 Gm23045-201ENSMUST00000175041 96 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm21092-201ENSMUST00000178995 955 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm4654-201ENSMUST00000183305 982 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
UbbP0CG49 Gm40414-201ENSMUST00000197608 481 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm30946-201ENSMUST00000198288 724 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Gm44323-201ENSMUST00000198689 129 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
UbbP0CG49 Gm7848-201ENSMUST00000210739 718 ntBASIC9.28□□□□□ -0.92
UbbP0CG49 Mt1-202ENSMUST00000211807 1085 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms