Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm2316-201ENSMUST00000190613 921 ntBASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm3889-201ENSMUST00000212467 612 ntBASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hoxc9P09633 AC174647.1-201ENSMUST00000227419 1271 ntBASIC13.81□□□□□ -0.2
Hoxc9P09633 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc9P09633 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc9P09633 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hoxc9P09633 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc9P09633 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm24981-201ENSMUST00000104459 132 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm11411-201ENSMUST00000117951 719 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm15032-201ENSMUST00000118547 411 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hoxc9P09633 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 CT025642.1-201ENSMUST00000224734 1219 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hoxc9P09633 AC242269.1-201ENSMUST00000227020 741 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm8848-201ENSMUST00000197270 1343 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Gm5174-201ENSMUST00000171131 1423 ntBASIC13.8□□□□□ -0.2
Hoxc9P09633 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc9P09633 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC13.8□□□□□ -0.2
Hoxc9P09633 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hoxc9P09633 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm23081-201ENSMUST00000157845 297 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC13.79□□□□□ -0.2
Hoxc9P09633 AC127583.1-201ENSMUST00000224351 540 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 AC154433.1-201ENSMUST00000224401 1183 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm9790-201ENSMUST00000054148 288 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm42587-201ENSMUST00000198462 1981 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.79□□□□□ -0.2
Hoxc9P09633 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Hoxc9P09633 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hoxc9P09633 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Hoxc9P09633 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms