Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm2956-202ENSMUST00000178722 450 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm10340-202ENSMUST00000188235 615 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 4930517L18Rik-201ENSMUST00000191880 482 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm30301-201ENSMUST00000199474 652 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Dbil5-201ENSMUST00000040806 581 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Olfr1115-201ENSMUST00000081986 1102 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm38220-201ENSMUST00000195774 1447 ntBASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.82□□□□□ -0.68
Col4a6B1AVK5 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm15720-201ENSMUST00000117133 282 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm8203-201ENSMUST00000173192 387 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Zfp419-201ENSMUST00000173446 916 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm37144-201ENSMUST00000195445 1150 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm7727-201ENSMUST00000219830 671 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Cacna2d3-208ENSMUST00000225985 918 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm37036-201ENSMUST00000192836 2506 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm36948-201ENSMUST00000194708 3247 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.81□□□□□ -0.68
Col4a6B1AVK5 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm23555-201ENSMUST00000157815 135 ntBASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm22669-201ENSMUST00000158723 318 ntBASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm29617-201ENSMUST00000185730 610 ntBASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm45780-201ENSMUST00000212089 224 ntBASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm8174-201ENSMUST00000064353 1001 ntBASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Gm20953-201ENSMUST00000216399 2614 ntBASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.8□□□□□ -0.68
Col4a6B1AVK5 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Ighv2-2-201ENSMUST00000103443 352 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC10.79□□□□□ -0.68
Col4a6B1AVK5 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms