Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm44397-201ENSMUST00000195950 113 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm42937-201ENSMUST00000197360 752 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm18893-201ENSMUST00000198416 943 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm44405-201ENSMUST00000198952 126 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm18935-201ENSMUST00000212692 664 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm32025-201ENSMUST00000217960 307 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm45925-201ENSMUST00000218882 744 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Psmb5-202ENSMUST00000227257 622 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm22058-201ENSMUST00000083393 310 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm38116-201ENSMUST00000193873 1533 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gnpda2-206ENSMUST00000166298 1755 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Dclre1c-203ENSMUST00000102988 2469 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gng7-202ENSMUST00000099462 3425 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Top3a-203ENSMUST00000117743 2932 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Ctnna3-201ENSMUST00000075099 2688 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Zfp169-201ENSMUST00000110110 2196 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 9330104G04Rik-202ENSMUST00000205647 1943 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm7789-202ENSMUST00000211273 1400 ntBASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Fam110c-201ENSMUST00000041133 3088 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Armcx2-207ENSMUST00000168264 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Dync1i2-207ENSMUST00000112142 2585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Dnajb13-204ENSMUST00000207405 2592 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Gm3880A0A1B0GSB3 Armcx5-201ENSMUST00000096321 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Zfp607a-201ENSMUST00000053722 2061 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Zfp185-203ENSMUST00000164800 3557 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Prpf6-201ENSMUST00000002529 3054 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Zfp180-201ENSMUST00000068975 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Olfr97-203ENSMUST00000213328 2168 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm4875-201ENSMUST00000118257 786 ntBASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm11736-201ENSMUST00000121468 505 ntBASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm12260-201ENSMUST00000122447 411 ntBASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC5.04□□□□□ -1.6
Gm3880A0A1B0GSB3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms