Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdhga6Q91XY2 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm12028-201ENSMUST00000118065 436 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm13323-201ENSMUST00000120245 1151 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm22344-201ENSMUST00000122642 278 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm25288-201ENSMUST00000122800 265 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm10020-201ENSMUST00000081993 612 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdhga6Q91XY2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm16209-201ENSMUST00000118457 627 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm10171-201ENSMUST00000126220 628 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm4775-201ENSMUST00000169588 402 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm17782-201ENSMUST00000174345 880 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm18733-202ENSMUST00000174447 401 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm23647-201ENSMUST00000175042 109 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Gm4705-201ENSMUST00000177415 354 ntBASIC10.78□□□□□ -0.68
Pcdhga6Q91XY2 Rn5s-201ENSMUST00000177555 119 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms