Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc28bQ8CEG5 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc28bQ8CEG5 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc28bQ8CEG5 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc28bQ8CEG5 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC10.59□□□□□ -0.71
Ccdc28bQ8CEG5 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc28bQ8CEG5 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ccdc28bQ8CEG5 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Ccdc28bQ8CEG5 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 AU018091-201ENSMUST00000171749 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Zmiz2-204ENSMUST00000109786 4319 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm11988-201ENSMUST00000122321 1069 ntBASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm4812-201ENSMUST00000182847 993 ntBASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Mir7051-201ENSMUST00000184167 73 ntBASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Ccdc28bQ8CEG5 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Fes-208ENSMUST00000206728 2707 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm22920-201ENSMUST00000102175 109 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm15515-201ENSMUST00000117827 822 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12136-201ENSMUST00000120460 1209 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Olfr209-203ENSMUST00000208875 1194 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm6082-201ENSMUST00000215204 454 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm18042-201ENSMUST00000219887 790 ntBASIC10.57□□□□□ -0.72
Ccdc28bQ8CEG5 Gm8385-201ENSMUST00000058999 643 ntBASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms