Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcn1Q64347 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm43999-201ENSMUST00000204286 2889 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm45089-201ENSMUST00000208082 2040 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm22495-201ENSMUST00000104492 126 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Mir1941-201ENSMUST00000157834 83 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.78□□□□□ -0.2
Clcn1Q64347 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm43906-201ENSMUST00000203194 906 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm8170-201ENSMUST00000218581 945 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm42479-201ENSMUST00000198654 1356 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.78□□□□□ -0.2
Clcn1Q64347 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcn1Q64347 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcn1Q64347 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clcn1Q64347 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clcn1Q64347 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clcn1Q64347 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Clcn1Q64347 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Clcn1Q64347 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
Clcn1Q64347 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm5764-201ENSMUST00000118817 885 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm13688-201ENSMUST00000121557 608 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm25288-201ENSMUST00000122800 265 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm5526-201ENSMUST00000153604 423 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.77□□□□□ -0.21
Clcn1Q64347 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm9574-201ENSMUST00000173127 845 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm8581-201ENSMUST00000188636 890 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm37857-201ENSMUST00000191784 1199 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm38262-201ENSMUST00000194760 1382 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Gm42516-201ENSMUST00000198691 767 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC13.77□□□□□ -0.21
Clcn1Q64347 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.77□□□□□ -0.21
Clcn1Q64347 AC129323.1-201ENSMUST00000216733 470 ntBASIC13.77□□□□□ -0.21
Clcn1Q64347 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Clcn1Q64347 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Clcn1Q64347 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms