Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Smarcc1P97496 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm13120-201ENSMUST00000117343 1446 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm13104-201ENSMUST00000119651 1446 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 A1cf-204ENSMUST00000224564 1432 ntBASIC13.47□□□□□ -0.25
Smarcc1P97496 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcc1P97496 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Smarcc1P97496 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Gm24074-201ENSMUST00000158178 260 ntBASIC13.46□□□□□ -0.25
Smarcc1P97496 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC13.46□□□□□ -0.25
Smarcc1P97496 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Gm6008-201ENSMUST00000206542 874 ntBASIC13.46□□□□□ -0.25
Smarcc1P97496 Gm18466-201ENSMUST00000209147 499 ntBASIC13.46□□□□□ -0.25
Smarcc1P97496 Gm18124-201ENSMUST00000210695 706 ntBASIC13.46□□□□□ -0.25
Smarcc1P97496 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC13.46□□□□□ -0.25
Smarcc1P97496 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Smarcc1P97496 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcc1P97496 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcc1P97496 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.46□□□□□ -0.26
Smarcc1P97496 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcc1P97496 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcc1P97496 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Smarcc1P97496 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.26
Smarcc1P97496 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Smarcc1P97496 Gm42521-201ENSMUST00000199190 2040 ntBASIC13.46□□□□□ -0.26
Smarcc1P97496 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm15599-201ENSMUST00000122283 1345 ntBASIC13.45□□□□□ -0.26
Smarcc1P97496 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Mir291b-201ENSMUST00000104838 79 ntBASIC13.45□□□□□ -0.26
Smarcc1P97496 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC13.45□□□□□ -0.26
Smarcc1P97496 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm42710-201ENSMUST00000200608 985 ntBASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm19798-201ENSMUST00000201502 457 ntBASIC13.45□□□□□ -0.26
Smarcc1P97496 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC13.45□□□□□ -0.26
Smarcc1P97496 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 AC164883.7-201ENSMUST00000228534 851 ntBASIC13.45□□□□□ -0.26
Smarcc1P97496 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm23458-201ENSMUST00000083257 169 ntBASIC13.45□□□□□ -0.26
Smarcc1P97496 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm6783-201ENSMUST00000120916 1437 ntBASIC13.45□□□□□ -0.26
Smarcc1P97496 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC13.45□□□□□ -0.26
Smarcc1P97496 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Smarcc1P97496 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.44□□□□□ -0.26
Smarcc1P97496 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Smarcc1P97496 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.44□□□□□ -0.26
Smarcc1P97496 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Smarcc1P97496 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms