Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC9.44□□□□□ -0.9
Lsm6P62313 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm6P62313 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.44□□□□□ -0.9
Lsm6P62313 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm6P62313 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm6P62313 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm6P62313 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Lsm6P62313 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.43□□□□□ -0.9
Lsm6P62313 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm42499-201ENSMUST00000196193 1412 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Lsm6P62313 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm11380-201ENSMUST00000118067 560 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 Gm6425-201ENSMUST00000136332 790 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.43□□□□□ -0.9
Lsm6P62313 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm42710-201ENSMUST00000200608 985 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Lsm6P62313 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.43□□□□□ -0.9
Lsm6P62313 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Lsm6P62313 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Lsm6P62313 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Lsm6P62313 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Lsm6P62313 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.43□□□□□ -0.9
Lsm6P62313 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Lsm6P62313 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm6P62313 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 AC153524.2-202ENSMUST00000220401 1794 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.42□□□□□ -0.9
Lsm6P62313 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Lsm6P62313 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm6P62313 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms