Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm17825-201ENSMUST00000206836 794 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Gm45224-201ENSMUST00000208203 414 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Gm8342-201ENSMUST00000209839 757 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Gm45575-201ENSMUST00000210283 548 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Gm18165-201ENSMUST00000217426 928 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lsm3P62311 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Fcamr-201ENSMUST00000027670 1743 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Rbbp4-201ENSMUST00000102598 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lsm3P62311 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gpatch4-201ENSMUST00000029707 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Vps39-201ENSMUST00000028752 4339 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Hdac7-207ENSMUST00000120683 3701 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm38116-201ENSMUST00000193873 1533 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Atp4a-201ENSMUST00000005692 3485 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Lsm3P62311 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm11411-201ENSMUST00000117951 719 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.63□□□□□ -0.87
Lsm3P62311 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm13786-201ENSMUST00000122371 333 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm8815-201ENSMUST00000173809 620 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm27514-201ENSMUST00000183692 110 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm27530-201ENSMUST00000184096 98 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm37852-201ENSMUST00000193027 350 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm44651-201ENSMUST00000207343 372 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.63□□□□□ -0.87
Lsm3P62311 AC133598.1-201ENSMUST00000224327 660 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Nedd4-201ENSMUST00000034740 5499 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Ctc1-201ENSMUST00000021278 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Osbpl3-201ENSMUST00000071728 3307 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Pcdhb6-201ENSMUST00000061717 3729 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Lsm3P62311 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm26805-201ENSMUST00000181885 3089 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Atg14-201ENSMUST00000042988 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.63□□□□□ -0.87
Lsm3P62311 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Lsm3P62311 Tnxa-201ENSMUST00000173277 2975 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.63□□□□□ -0.87
Lsm3P62311 Kng1-202ENSMUST00000039492 1985 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Lsm3P62311 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC9.62□□□□□ -0.87
Lsm3P62311 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Thsd1-201ENSMUST00000069828 4422 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Lsm3P62311 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.62□□□□□ -0.87
Lsm3P62311 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms