Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.92□□□□□ -0.66
SftpbP50405 Gm16165-201ENSMUST00000160140 795 ntBASIC10.92□□□□□ -0.66
SftpbP50405 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.92□□□□□ -0.66
SftpbP50405 Gm17826-201ENSMUST00000189720 798 ntBASIC10.92□□□□□ -0.66
SftpbP50405 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.92□□□□□ -0.66
SftpbP50405 Gm44155-201ENSMUST00000203923 412 ntBASIC10.92□□□□□ -0.66
SftpbP50405 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC10.92□□□□□ -0.66
SftpbP50405 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.92□□□□□ -0.66
SftpbP50405 Id2-203ENSMUST00000222667 958 ntBASIC10.92□□□□□ -0.66
SftpbP50405 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.92□□□□□ -0.66
SftpbP50405 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.92□□□□□ -0.66
SftpbP50405 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
SftpbP50405 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
SftpbP50405 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SftpbP50405 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SftpbP50405 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SftpbP50405 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SftpbP50405 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SftpbP50405 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.91□□□□□ -0.66
SftpbP50405 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
SftpbP50405 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Gm16518-201ENSMUST00000117960 508 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Mir1893-201ENSMUST00000122565 83 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.91□□□□□ -0.66
SftpbP50405 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Gm4812-201ENSMUST00000182847 993 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Gm43671-201ENSMUST00000200422 433 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Gm44980-201ENSMUST00000205826 314 ntBASIC10.91□□□□□ -0.66
SftpbP50405 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.91□□□□□ -0.66
SftpbP50405 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.91□□□□□ -0.66
SftpbP50405 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
SftpbP50405 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Gm12097-201ENSMUST00000121523 1414 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SftpbP50405 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SftpbP50405 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.91□□□□□ -0.66
SftpbP50405 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.91□□□□□ -0.66
SftpbP50405 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
SftpbP50405 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.9□□□□□ -0.66
SftpbP50405 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.9□□□□□ -0.66
SftpbP50405 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.9□□□□□ -0.66
SftpbP50405 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
SftpbP50405 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.9□□□□□ -0.66
SftpbP50405 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.9□□□□□ -0.66
SftpbP50405 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.9□□□□□ -0.66
SftpbP50405 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SftpbP50405 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.9□□□□□ -0.66
SftpbP50405 Gm12389-201ENSMUST00000117696 418 ntBASIC10.9□□□□□ -0.66
SftpbP50405 Gm15554-201ENSMUST00000120406 913 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms