Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rfx3P48381 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rfx3P48381 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm11246-201ENSMUST00000120880 345 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Gm27910-201ENSMUST00000185004 107 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Platr10-202ENSMUST00000191479 818 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Gm37299-201ENSMUST00000193951 826 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Gm37458-201ENSMUST00000194055 410 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm44980-201ENSMUST00000205826 314 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Gm45550-201ENSMUST00000209380 946 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Gm31941-201ENSMUST00000209689 350 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.68□□□□□ -0.86
Rfx3P48381 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Rfx3P48381 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.68□□□□□ -0.86
Rfx3P48381 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Rfx3P48381 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.68□□□□□ -0.86
Rfx3P48381 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rfx3P48381 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Rfx3P48381 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Rfx3P48381 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
Rfx3P48381 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC9.67□□□□□ -0.86
Rfx3P48381 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rfx3P48381 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm16071-201ENSMUST00000119589 793 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm23771-201ENSMUST00000178702 110 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm7985-201ENSMUST00000183329 981 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Rfx3P48381 Gm28746-201ENSMUST00000187453 380 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm17826-201ENSMUST00000189720 798 ntBASIC9.67□□□□□ -0.86
Rfx3P48381 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.67□□□□□ -0.86
Rfx3P48381 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms