Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Gm42587-201ENSMUST00000198462 1981 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Gm25063-201ENSMUST00000104666 94 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Gm14807-201ENSMUST00000116640 983 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC9.38□□□□□ -0.91
Upk2P38575 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.38□□□□□ -0.91
Upk2P38575 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Gm22876-201ENSMUST00000175450 298 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Gm28833-201ENSMUST00000189671 559 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.38□□□□□ -0.91
Upk2P38575 Gm7082-201ENSMUST00000209880 969 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.38□□□□□ -0.91
Upk2P38575 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 AC166341.2-201ENSMUST00000220571 120 ntBASIC9.38□□□□□ -0.91
Upk2P38575 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Upk2P38575 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Gm5159-201ENSMUST00000212733 1652 ntBASIC9.38□□□□□ -0.91
Upk2P38575 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Upk2P38575 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Upk2P38575 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.37□□□□□ -0.91
Upk2P38575 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Upk2P38575 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC9.37□□□□□ -0.91
Upk2P38575 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Gm22442-201ENSMUST00000157256 144 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
Upk2P38575 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC9.37□□□□□ -0.91
Upk2P38575 Gm8918-201ENSMUST00000190587 1087 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Gm44304-201ENSMUST00000200509 145 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Gm44551-201ENSMUST00000208804 171 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Gm9139-201ENSMUST00000218817 700 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Gm18556-201ENSMUST00000219748 1031 ntBASIC9.37□□□□□ -0.91
Upk2P38575 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.37□□□□□ -0.91
Upk2P38575 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.37□□□□□ -0.91
Upk2P38575 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Upk2P38575 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Mir194-2-201ENSMUST00000083648 86 ntBASIC9.37□□□□□ -0.91
Upk2P38575 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Upk2P38575 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Upk2P38575 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Upk2P38575 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms