Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col8a2P25318 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col8a2P25318 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col8a2P25318 Gm32914-201ENSMUST00000203815 2228 ntBASIC8.95□□□□□ -0.98
Col8a2P25318 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm45011-201ENSMUST00000207620 2297 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm15554-201ENSMUST00000120406 913 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Gm16459-201ENSMUST00000121443 686 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm4862-201ENSMUST00000170405 438 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm44155-201ENSMUST00000203923 412 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm5449-201ENSMUST00000081132 357 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Gm10238-201ENSMUST00000089689 408 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col8a2P25318 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Col8a2P25318 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Col8a2P25318 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm8684-201ENSMUST00000195078 1564 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Col8a2P25318 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
Col8a2P25318 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 AC153524.2-202ENSMUST00000220401 1794 ntBASIC8.94□□□□□ -0.98
Col8a2P25318 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Col8a2P25318 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm10699-201ENSMUST00000098916 2130 ntBASIC8.93□□□□□ -0.98
Col8a2P25318 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Col8a2P25318 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Col8a2P25318 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms