Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc9P09633 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Hoxc9P09633 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc9P09633 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC13.84□□□□□ -0.19
Hoxc9P09633 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Hoxc9P09633 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc9P09633 AC154220.1-201ENSMUST00000225033 1705 ntBASIC13.84□□□□□ -0.19
Hoxc9P09633 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc9P09633 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc9P09633 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc9P09633 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Hoxc9P09633 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc9P09633 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
Hoxc9P09633 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc9P09633 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Hoxc9P09633 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Hoxc9P09633 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc9P09633 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hoxc9P09633 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC13.83□□□□□ -0.2
Hoxc9P09633 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC13.83□□□□□ -0.2
Hoxc9P09633 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC13.83□□□□□ -0.2
Hoxc9P09633 Gm8864-201ENSMUST00000118653 1010 ntBASIC13.83□□□□□ -0.2
Hoxc9P09633 Gm6500-201ENSMUST00000119412 451 ntBASIC13.83□□□□□ -0.2
Hoxc9P09633 Gm14829-201ENSMUST00000121499 1138 ntBASIC13.83□□□□□ -0.2
Hoxc9P09633 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC13.83□□□□□ -0.2
Hoxc9P09633 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC13.83□□□□□ -0.2
Hoxc9P09633 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxc9P09633 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Hoxc9P09633 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Hoxc9P09633 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc9P09633 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxc9P09633 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm14571-201ENSMUST00000118292 570 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm12736-201ENSMUST00000119330 236 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Polr1c-203ENSMUST00000124655 829 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm20474-201ENSMUST00000180089 596 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm26532-201ENSMUST00000180630 690 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm42780-201ENSMUST00000197083 734 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm5189-201ENSMUST00000221796 261 ntBASIC13.82□□□□□ -0.2
Hoxc9P09633 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hoxc9P09633 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hoxc9P09633 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Olfr543-202ENSMUST00000219647 1456 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hoxc9P09633 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm11540-201ENSMUST00000117457 780 ntBASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm11771-201ENSMUST00000118124 732 ntBASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm15132-201ENSMUST00000118581 652 ntBASIC13.81□□□□□ -0.2
Hoxc9P09633 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC13.81□□□□□ -0.2
Hoxc9P09633 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC13.81□□□□□ -0.2
Hoxc9P09633 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms