Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Pkd1l2-202ENSMUST00000109093 7389 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Gm15264-201ENSMUST00000118050 502 ntBASIC7.8□□□□□ -1.16
TcraP01849 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC7.8□□□□□ -1.16
TcraP01849 Gm15207-201ENSMUST00000119259 442 ntBASIC7.8□□□□□ -1.16
TcraP01849 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC7.8□□□□□ -1.16
TcraP01849 Gm4310-201ENSMUST00000177847 889 ntBASIC7.8□□□□□ -1.16
TcraP01849 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC7.8□□□□□ -1.16
TcraP01849 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Gm7985-201ENSMUST00000183329 981 ntBASIC7.8□□□□□ -1.16
TcraP01849 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Gm28686-201ENSMUST00000187404 609 ntBASIC7.8□□□□□ -1.16
TcraP01849 Gm18038-201ENSMUST00000197900 485 ntBASIC7.8□□□□□ -1.16
TcraP01849 Gm9678-201ENSMUST00000198979 1149 ntBASIC7.8□□□□□ -1.16
TcraP01849 Gm42867-201ENSMUST00000202995 469 ntBASIC7.8□□□□□ -1.16
TcraP01849 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC7.8□□□□□ -1.16
TcraP01849 Gm45433-201ENSMUST00000209386 247 ntBASIC7.8□□□□□ -1.16
TcraP01849 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC7.8□□□□□ -1.16
TcraP01849 AC122891.1-201ENSMUST00000218671 268 ntBASIC7.8□□□□□ -1.16
TcraP01849 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Prpf40a-201ENSMUST00000076313 7374 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Hsp90aa1-202ENSMUST00000094361 3281 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
TcraP01849 Fam53b-202ENSMUST00000097998 4341 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
TcraP01849 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC7.8□□□□□ -1.16
TcraP01849 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
TcraP01849 Atp10d-202ENSMUST00000126664 6052 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Crry-ps-201ENSMUST00000079090 1309 ntBASIC7.79□□□□□ -1.16
TcraP01849 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
TcraP01849 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
TcraP01849 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Chrm1-201ENSMUST00000035444 4159 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Il20rb-201ENSMUST00000098458 2793 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
TcraP01849 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 AC117648.1-201ENSMUST00000219777 2510 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm45165-201ENSMUST00000207763 1631 ntBASIC7.79□□□□□ -1.16
TcraP01849 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Gpm6b-205ENSMUST00000112227 3294 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
TcraP01849 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Snord17-201ENSMUST00000104526 238 ntBASIC7.79□□□□□ -1.16
TcraP01849 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Gm11783-201ENSMUST00000119549 885 ntBASIC7.79□□□□□ -1.16
TcraP01849 Mup-ps29-201ENSMUST00000122281 202 ntBASIC7.79□□□□□ -1.16
TcraP01849 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC7.79□□□□□ -1.16
TcraP01849 Gm26083-201ENSMUST00000157904 193 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
TcraP01849 Gm5616-201ENSMUST00000165252 384 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm17376-201ENSMUST00000166016 84 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Gm8741-201ENSMUST00000174736 384 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm7584-201ENSMUST00000175829 940 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC7.79□□□□□ -1.16
TcraP01849 Gm5342-201ENSMUST00000181982 1003 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC7.79□□□□□ -1.16
TcraP01849 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Gm44262-201ENSMUST00000204969 372 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm45856-201ENSMUST00000212752 416 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC7.79□□□□□ -1.16
TcraP01849 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC7.79□□□□□ -1.16
TcraP01849 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
TcraP01849 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
TcraP01849 Gm4978-201ENSMUST00000071565 801 ntBASIC7.79□□□□□ -1.16
TcraP01849 Gm25125-201ENSMUST00000083340 136 ntBASIC7.79□□□□□ -1.16
TcraP01849 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms