Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm38309-201ENSMUST00000192063 1518 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Garnl3-207ENSMUST00000137381 3551 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Cd22-213ENSMUST00000190617 3230 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gm12133-201ENSMUST00000121775 661 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gm10754-202ENSMUST00000220233 1633 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gm25947-201ENSMUST00000180343 110 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Gm42402-201ENSMUST00000208341 1054 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 AC116390.1-201ENSMUST00000227975 670 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Dchs1E9PVD3 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gm24981-201ENSMUST00000104459 132 ntBASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gm12464-201ENSMUST00000121385 1016 ntBASIC9.19□□□□□ -0.94
Dchs1E9PVD3 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 AC140393.4-201ENSMUST00000226994 765 ntBASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC9.19□□□□□ -0.94
Dchs1E9PVD3 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Dchs1E9PVD3 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Dchs1E9PVD3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms