Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Sec61a2Q9JLR1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm12516-201ENSMUST00000120819 385 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm28032-201ENSMUST00000184104 96 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Lgi3-203ENSMUST00000226548 1001 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Sec61a2Q9JLR1 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm15744-201ENSMUST00000161734 213 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Mir6998-201ENSMUST00000183343 64 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Mir6407-201ENSMUST00000184510 101 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm30946-201ENSMUST00000198288 724 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Gm45594-201ENSMUST00000211717 241 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 AC132901.1-201ENSMUST00000224345 508 ntBASIC9.69□□□□□ -0.86
Sec61a2Q9JLR1 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms