Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm11919-201ENSMUST00000117609 721 ntBASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm29155-201ENSMUST00000185910 269 ntBASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm34379-201ENSMUST00000195036 290 ntBASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm12397-201ENSMUST00000117674 615 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm24312-201ENSMUST00000178677 119 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm5189-201ENSMUST00000221796 261 ntBASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Upk3aQ9JKX8 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Gm22582-201ENSMUST00000102283 94 ntBASIC10.3□□□□□ -0.76
Upk3aQ9JKX8 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms