Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trim13Q9CYB0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm24891-201ENSMUST00000104391 136 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm12501-201ENSMUST00000119163 529 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm15566-201ENSMUST00000121130 590 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm24844-201ENSMUST00000158679 127 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm21778-201ENSMUST00000178779 471 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm27341-201ENSMUST00000183570 106 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 AC102542.1-201ENSMUST00000225204 1138 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Pde11a-201ENSMUST00000099992 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm18719-201ENSMUST00000196696 1413 ntBASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trim13Q9CYB0 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Zbtb34-202ENSMUST00000113158 6602 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm14277-201ENSMUST00000121195 360 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm23694-201ENSMUST00000179335 110 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm45071-201ENSMUST00000205353 571 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm44506-201ENSMUST00000206278 965 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm31941-201ENSMUST00000209689 350 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC9.94□□□□□ -0.82
Trim13Q9CYB0 Gm18730-201ENSMUST00000218038 343 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms