Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Otud1Q9CUB6 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 BC043934-202ENSMUST00000185694 2356 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm14938-201ENSMUST00000119482 943 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm16147-201ENSMUST00000162143 373 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm20778-201ENSMUST00000178524 627 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm5700-201ENSMUST00000191483 989 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm43489-201ENSMUST00000196810 993 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm43249-201ENSMUST00000200464 458 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm19269-201ENSMUST00000211401 804 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 AC132384.6-201ENSMUST00000218976 1206 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 AC134793.1-202ENSMUST00000227444 803 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm4604-201ENSMUST00000025040 390 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm8181-201ENSMUST00000062242 669 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Gm42478-201ENSMUST00000199252 1467 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Otud1Q9CUB6 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Otud1Q9CUB6 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Aebp2-205ENSMUST00000160836 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm19210-201ENSMUST00000199562 1350 ntBASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Otud1Q9CUB6 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 130.6 ms