Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm37804-201ENSMUST00000192206 547 ntTSL 5 BASIC11.9□□□□□ -0.51
Pcdh15Q99PJ1 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC11.9□□□□□ -0.51
Pcdh15Q99PJ1 Gm40604-201ENSMUST00000217765 655 ntTSL 5 BASIC11.9□□□□□ -0.51
Pcdh15Q99PJ1 Olfr170-203ENSMUST00000218837 1008 ntAPPRIS P2 BASIC11.9□□□□□ -0.51
Pcdh15Q99PJ1 Olfr170-201ENSMUST00000078603 1008 ntAPPRIS ALT1 BASIC11.9□□□□□ -0.51
Pcdh15Q99PJ1 Olfr169-201ENSMUST00000090062 942 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Pcdh15Q99PJ1 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Pcdh15Q99PJ1 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm14264-201ENSMUST00000147141 1864 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Ppp1r9a-206ENSMUST00000175962 3769 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm5310-201ENSMUST00000197861 1511 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Ighv2-5-201ENSMUST00000103449 347 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm37390-201ENSMUST00000192452 872 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm18538-201ENSMUST00000204265 484 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm18030-201ENSMUST00000222163 731 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm32072-201ENSMUST00000200803 1434 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 AC167565.2-201ENSMUST00000227042 1870 ntBASIC11.89□□□□□ -0.51
Pcdh15Q99PJ1 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Spaca3-201ENSMUST00000103222 831 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Rpsa-ps11-201ENSMUST00000118446 889 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm15580-201ENSMUST00000121587 556 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm7180-201ENSMUST00000121753 513 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm29617-201ENSMUST00000185730 610 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 AC100406.1-201ENSMUST00000217305 480 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 AC161374.2-201ENSMUST00000223662 596 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm6682-201ENSMUST00000169666 1346 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 C130026L21Rik-204ENSMUST00000199587 1838 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm11401-201ENSMUST00000117212 344 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Vpreb3-202ENSMUST00000121151 729 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm14856-201ENSMUST00000121548 613 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm20821-202ENSMUST00000180352 684 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Trav4-1-201ENSMUST00000199078 330 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm7319-201ENSMUST00000210047 778 ntBASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdh15Q99PJ1 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdh15Q99PJ1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms