Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RtcbQ99LF4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RtcbQ99LF4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Gm13215-201ENSMUST00000117559 472 ntBASIC13.27□□□□□ -0.29
RtcbQ99LF4 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Gm8960-201ENSMUST00000219787 788 ntBASIC13.27□□□□□ -0.29
RtcbQ99LF4 AC166061.1-201ENSMUST00000225163 1138 ntBASIC13.27□□□□□ -0.29
RtcbQ99LF4 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.27□□□□□ -0.29
RtcbQ99LF4 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
RtcbQ99LF4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm24161-201ENSMUST00000104592 130 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm8482-201ENSMUST00000117972 471 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm13841-201ENSMUST00000118829 483 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm11449-201ENSMUST00000119175 476 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm16480-201ENSMUST00000120439 832 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm5174-201ENSMUST00000171131 1423 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm8210-201ENSMUST00000178557 483 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm15454-201ENSMUST00000179718 483 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm38145-201ENSMUST00000192319 693 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm5543-201ENSMUST00000193329 1091 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm45110-201ENSMUST00000205704 1402 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm8268-201ENSMUST00000209683 458 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm6344-201ENSMUST00000075962 483 ntBASIC13.26□□□□□ -0.29
RtcbQ99LF4 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RtcbQ99LF4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RtcbQ99LF4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms