Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdhb18Q91Y02 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Gm43854-201ENSMUST00000200418 394 ntBASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Gm18042-201ENSMUST00000219887 790 ntBASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Mir326-201ENSMUST00000083637 95 ntBASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhb18Q91Y02 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Wbp1-209ENSMUST00000205023 716 ntBASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhb18Q91Y02 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms