Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Ntpcr-208ENSMUST00000152189 822 ntTSL 3 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Gm37232-201ENSMUST00000194887 367 ntBASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Gm5302-201ENSMUST00000202130 796 ntBASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 1810059H22Rik-202ENSMUST00000203662 546 ntTSL 3 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Gm45521-201ENSMUST00000211339 676 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 AC164123.1-201ENSMUST00000213385 447 ntTSL 5 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Tmem14a-201ENSMUST00000027064 1261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pabpn1Q8CCS6 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Pabpn1Q8CCS6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pabpn1Q8CCS6 Gm43868-201ENSMUST00000205187 2114 ntBASIC16.33■□□□□ 0.21
Pabpn1Q8CCS6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Apex2-202ENSMUST00000112719 969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm12489-201ENSMUST00000119364 148 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm13413-201ENSMUST00000120953 602 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm15499-201ENSMUST00000141390 422 ntTSL 5 BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm24298-201ENSMUST00000158299 60 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm4252-201ENSMUST00000174823 313 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Ly6g6c-203ENSMUST00000174876 723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 AC124581.2-201ENSMUST00000225459 282 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm14267-205ENSMUST00000226697 1299 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 1810011H11Rik-202ENSMUST00000227060 496 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 AC113178.1-201ENSMUST00000227616 935 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 AC115891.2-201ENSMUST00000218448 1341 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm43225-201ENSMUST00000201381 1439 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm42527-201ENSMUST00000198173 1480 ntBASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pabpn1Q8CCS6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Gm15355-201ENSMUST00000118929 285 ntBASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Gm5389-201ENSMUST00000120893 1176 ntBASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Gm15423-201ENSMUST00000150600 1430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Cdrt4os1-202ENSMUST00000153180 1109 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Gm44156-201ENSMUST00000203885 1189 ntBASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Gm32858-201ENSMUST00000205246 585 ntBASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Rcvrn-201ENSMUST00000021290 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 AC100729.1-201ENSMUST00000225458 1454 ntBASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Defa32-201ENSMUST00000084041 425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Defa20-201ENSMUST00000084042 425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pabpn1Q8CCS6 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Gm10251-202ENSMUST00000181786 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Gm4798-201ENSMUST00000218024 1699 ntBASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Gm8603-201ENSMUST00000115649 1515 ntBASIC16.31■□□□□ 0.2
Pabpn1Q8CCS6 Mfap5-207ENSMUST00000148517 1506 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms