Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm44445-201ENSMUST00000204075 2683 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm16166-201ENSMUST00000118291 787 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm12337-201ENSMUST00000119634 400 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm25732-201ENSMUST00000175168 60 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Mir8115-201ENSMUST00000184992 119 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm40414-201ENSMUST00000197608 481 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm5599-201ENSMUST00000209602 788 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 AC122350.1-201ENSMUST00000228135 533 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 AC122881.1-201ENSMUST00000225757 2695 ntBASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nhlrc3Q8CCH2 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Mroh3-205ENSMUST00000212798 2933 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Fam217a-202ENSMUST00000223834 2253 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm11949-201ENSMUST00000117640 372 ntBASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm13045-201ENSMUST00000119019 712 ntBASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm4726-201ENSMUST00000135604 736 ntBASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm6019-201ENSMUST00000148369 736 ntBASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm4812-201ENSMUST00000182847 993 ntBASIC9.05□□□□□ -0.96
Nhlrc3Q8CCH2 Gm19353-201ENSMUST00000184561 445 ntBASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms