Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp44Q8C2S0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm8482-201ENSMUST00000117972 471 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm13841-201ENSMUST00000118829 483 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm11449-201ENSMUST00000119175 476 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm16547-201ENSMUST00000159474 293 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm8210-201ENSMUST00000178557 483 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm15454-201ENSMUST00000179718 483 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 AC164883.7-201ENSMUST00000228534 851 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm6344-201ENSMUST00000075962 483 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Usp44Q8C2S0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Usp44Q8C2S0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC12.52□□□□□ -0.4
Usp44Q8C2S0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Usp44Q8C2S0 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Usp44Q8C2S0 Gm32914-201ENSMUST00000203815 2228 ntBASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Gm22937-201ENSMUST00000103954 131 ntBASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Gm37020-201ENSMUST00000195303 992 ntBASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.52□□□□□ -0.41
Usp44Q8C2S0 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Toe1-201ENSMUST00000030451 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Usp44Q8C2S0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Usp44Q8C2S0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms