Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
VcanQ62059 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Mir1893-201ENSMUST00000122565 83 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC9.75□□□□□ -0.85
VcanQ62059 Mir6972-201ENSMUST00000184774 64 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Gm31243-201ENSMUST00000197498 632 ntTSL 2 BASIC9.75□□□□□ -0.85
VcanQ62059 CT025579.2-201ENSMUST00000225280 816 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
VcanQ62059 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC9.75□□□□□ -0.85
VcanQ62059 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC9.75□□□□□ -0.85
VcanQ62059 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
VcanQ62059 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC9.75□□□□□ -0.85
VcanQ62059 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC9.75□□□□□ -0.85
VcanQ62059 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Gm25129-201ENSMUST00000082651 133 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Zfp410-208ENSMUST00000222258 2329 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.75□□□□□ -0.85
VcanQ62059 Gm28905-202ENSMUST00000219328 1377 ntTSL 5 BASIC9.75□□□□□ -0.85
VcanQ62059 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Gm13527-201ENSMUST00000117926 691 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Gm11888-201ENSMUST00000120471 810 ntBASIC9.75□□□□□ -0.85
VcanQ62059 3300005D01Rik-204ENSMUST00000181484 1174 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Gm6463-201ENSMUST00000182090 966 ntBASIC9.75□□□□□ -0.85
VcanQ62059 AC113178.1-201ENSMUST00000227616 935 ntBASIC9.75□□□□□ -0.85
VcanQ62059 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.75□□□□□ -0.85
VcanQ62059 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.75□□□□□ -0.85
VcanQ62059 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
VcanQ62059 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
VcanQ62059 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Gdnf-201ENSMUST00000022744 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Gm13864-201ENSMUST00000119745 785 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Hsd17b13-203ENSMUST00000120320 1118 ntTSL 5 BASIC9.74□□□□□ -0.85
VcanQ62059 Gm4398-201ENSMUST00000182698 992 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm5710-201ENSMUST00000183020 995 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm38153-201ENSMUST00000195484 472 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm23786-202ENSMUST00000200181 119 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Pcbd1-202ENSMUST00000218005 361 ntTSL 3 BASIC9.74□□□□□ -0.85
VcanQ62059 AC154528.3-201ENSMUST00000228011 679 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Cnfn-201ENSMUST00000076276 524 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
VcanQ62059 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
VcanQ62059 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Syncrip-211ENSMUST00000174688 3176 ntTSL 5 BASIC9.74□□□□□ -0.85
VcanQ62059 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Gm21115-201ENSMUST00000187565 2578 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Gm7910-201ENSMUST00000117896 835 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm12192-201ENSMUST00000120146 487 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm22009-201ENSMUST00000158792 343 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.74□□□□□ -0.85
VcanQ62059 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC9.74□□□□□ -0.85
VcanQ62059 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC9.74□□□□□ -0.85
VcanQ62059 Gm30196-201ENSMUST00000208957 160 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.74□□□□□ -0.85
VcanQ62059 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Gm43225-201ENSMUST00000201381 1439 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm36595-201ENSMUST00000218830 2006 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
VcanQ62059 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
VcanQ62059 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Rcvrn-201ENSMUST00000021290 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 CT030657.4-201ENSMUST00000222177 744 ntBASIC9.74□□□□□ -0.85
VcanQ62059 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
VcanQ62059 Lrrcc1-202ENSMUST00000108370 3359 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
VcanQ62059 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
VcanQ62059 Gm8603-201ENSMUST00000115649 1515 ntBASIC9.73□□□□□ -0.85
VcanQ62059 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
VcanQ62059 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
VcanQ62059 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms