Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Tmem255a-201ENSMUST00000066498 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Cpsf3-201ENSMUST00000067284 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ccbe1Q3MI99 Fxr1-208ENSMUST00000200392 3014 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Padi3-201ENSMUST00000026377 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Mirg-204ENSMUST00000182185 3822 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Nup107-201ENSMUST00000064848 3114 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 AC113441.2-201ENSMUST00000221538 1468 ntBASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 BC005624-201ENSMUST00000028205 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Gm12661-201ENSMUST00000118780 3335 ntBASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Rorb-202ENSMUST00000112828 2854 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ccbe1Q3MI99 Pde1c-204ENSMUST00000164752 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Smok4a-202ENSMUST00000144015 2317 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Psat1-201ENSMUST00000025542 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 AC113125.1-201ENSMUST00000226852 1774 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Arhgap36-201ENSMUST00000042444 2733 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Dennd6a-205ENSMUST00000224378 2424 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm43135-201ENSMUST00000196442 3462 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm15264-201ENSMUST00000118050 502 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm43138-201ENSMUST00000199123 708 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Il6st-210ENSMUST00000184949 2571 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Xlr3a-201ENSMUST00000074619 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ccbe1Q3MI99 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms