Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Trim63Q38HM4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC8.77□□□□□ -1.01
Trim63Q38HM4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trim63Q38HM4 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Cipc-205ENSMUST00000187814 4098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Cipc-201ENSMUST00000038369 4098 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Acvr1-203ENSMUST00000112599 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Nedd4l-211ENSMUST00000226058 3393 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm13342-201ENSMUST00000121055 207 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm37694-201ENSMUST00000191696 2133 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm34767-201ENSMUST00000191813 1062 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm18289-201ENSMUST00000203356 2989 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm44008-201ENSMUST00000204345 412 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm44872-201ENSMUST00000207864 420 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Pfdn4-202ENSMUST00000075087 816 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gulo-201ENSMUST00000059970 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 March1-206ENSMUST00000110256 3288 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Hdac7-206ENSMUST00000119670 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Srp54b-201ENSMUST00000164243 2317 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Fgd3-202ENSMUST00000110086 2628 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Stx12-201ENSMUST00000030698 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Smim1-202ENSMUST00000126119 3996 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Gm37671-201ENSMUST00000193198 2096 ntBASIC8.76□□□□□ -1.01
Trim63Q38HM4 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Trim63Q38HM4 Ankdd1b-201ENSMUST00000055607 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Best3-201ENSMUST00000020378 2719 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Baz2a-208ENSMUST00000220049 8443 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Zfp169-201ENSMUST00000110110 2196 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Cyb5d2-203ENSMUST00000156294 2158 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm14071-201ENSMUST00000117817 509 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm12164-201ENSMUST00000121695 551 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm15429-201ENSMUST00000151268 798 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm7985-201ENSMUST00000183329 981 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm28746-201ENSMUST00000187453 380 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm37458-201ENSMUST00000194055 410 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm38341-201ENSMUST00000195357 515 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Trim63Q38HM4 Gm37242-201ENSMUST00000191873 2085 ntBASIC8.75□□□□□ -1.01
Trim63Q38HM4 Sftpa1-202ENSMUST00000170719 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms