Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm18182-201ENSMUST00000191380 1251 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm44304-201ENSMUST00000200509 145 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 AC163646.3-202ENSMUST00000228685 691 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm45041-201ENSMUST00000207366 3108 ntBASIC13.5□□□□□ -0.25
Nkx2-3P97334 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nkx2-3P97334 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm6727-201ENSMUST00000204102 1518 ntBASIC13.49□□□□□ -0.25
Nkx2-3P97334 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC13.49□□□□□ -0.25
Nkx2-3P97334 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm22662-201ENSMUST00000175290 256 ntBASIC13.49□□□□□ -0.25
Nkx2-3P97334 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.49□□□□□ -0.25
Nkx2-3P97334 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC13.49□□□□□ -0.25
Nkx2-3P97334 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm6312-201ENSMUST00000204060 1194 ntBASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm45308-201ENSMUST00000210610 415 ntBASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm5189-201ENSMUST00000221796 261 ntBASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gm8615-201ENSMUST00000025307 771 ntBASIC13.49□□□□□ -0.25
Nkx2-3P97334 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nkx2-3P97334 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm14699-201ENSMUST00000122340 228 ntBASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC13.48□□□□□ -0.25
Nkx2-3P97334 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nkx2-3P97334 Gm38111-201ENSMUST00000194817 2741 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms