Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm45797-201ENSMUST00000212759 1921 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Il1rap-201ENSMUST00000023156 4520 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Rbm27-202ENSMUST00000091920 6266 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm3P62311 AC123534.1-202ENSMUST00000224256 1837 ntBASIC9.66□□□□□ -0.86
Lsm3P62311 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.65□□□□□ -0.86
Lsm3P62311 Gm45495-201ENSMUST00000200940 1700 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Pik3c3-202ENSMUST00000115811 3084 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Ankk1-201ENSMUST00000034792 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Tgfbi-201ENSMUST00000045173 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Hinfp-205ENSMUST00000216508 5333 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Lsm3P62311 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Psat1-201ENSMUST00000025542 2617 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Mc3r-201ENSMUST00000038532 2623 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Lsm3P62311 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Nrp2-201ENSMUST00000027112 4216 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Epb41-206ENSMUST00000105974 4844 ntTSL 5 BASIC9.65□□□□□ -0.86
Lsm3P62311 Proser3-201ENSMUST00000062708 1905 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Lsm3P62311 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.86
Lsm3P62311 Gm15374-201ENSMUST00000119313 844 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Ptgds-201ENSMUST00000015234 901 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Gm31256-201ENSMUST00000194705 506 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Gm6266-201ENSMUST00000203844 806 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Gm44551-201ENSMUST00000208804 171 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Lsm3P62311 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Gm26448-201ENSMUST00000082446 203 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Lsm3P62311 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lsm3P62311 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Rsrc1-201ENSMUST00000046542 3062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Nedd4l-211ENSMUST00000226058 3393 ntBASIC9.65□□□□□ -0.86
Lsm3P62311 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm3P62311 Scml4-202ENSMUST00000105494 4166 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm3P62311 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm3P62311 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm3P62311 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm3P62311 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC9.65□□□□□ -0.87
Lsm3P62311 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Lsm3P62311 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm3P62311 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm3P62311 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Lsm3P62311 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.65□□□□□ -0.87
Lsm3P62311 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Serpina3m-201ENSMUST00000101078 1658 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Serpina3m-202ENSMUST00000168797 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Cald1-203ENSMUST00000115021 4041 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Rorc-201ENSMUST00000029795 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Lsm3P62311 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 AC159819.3-201ENSMUST00000216940 1837 ntBASIC9.64□□□□□ -0.87
Lsm3P62311 Ssb-206ENSMUST00000166411 2088 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Hk1-201ENSMUST00000072357 3639 ntAPPRIS P4 TSL 5 BASIC9.64□□□□□ -0.87
Lsm3P62311 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Rabgef1-201ENSMUST00000026390 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Lsm3P62311 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.64□□□□□ -0.87
Lsm3P62311 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Lsm3P62311 Gm4812-201ENSMUST00000182847 993 ntBASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms