Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC8.8□□□□□ -1
VhlP40338 Gm14058-201ENSMUST00000116082 735 ntBASIC8.8□□□□□ -1
VhlP40338 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC8.8□□□□□ -1
VhlP40338 Gm16518-201ENSMUST00000117960 508 ntBASIC8.8□□□□□ -1
VhlP40338 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC8.8□□□□□ -1
VhlP40338 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC8.8□□□□□ -1
VhlP40338 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC8.8□□□□□ -1
VhlP40338 Mir5132-201ENSMUST00000175166 71 ntBASIC8.8□□□□□ -1
VhlP40338 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC8.8□□□□□ -1
VhlP40338 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
VhlP40338 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC8.8□□□□□ -1
VhlP40338 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC8.8□□□□□ -1
VhlP40338 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
VhlP40338 CT025679.1-201ENSMUST00000227106 449 ntBASIC8.8□□□□□ -1
VhlP40338 AC154589.2-201ENSMUST00000228847 251 ntBASIC8.8□□□□□ -1
VhlP40338 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.8□□□□□ -1
VhlP40338 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC8.8□□□□□ -1
VhlP40338 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC8.8□□□□□ -1
VhlP40338 Gm5451-201ENSMUST00000080545 579 ntBASIC8.8□□□□□ -1
VhlP40338 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
VhlP40338 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
VhlP40338 Gm38312-201ENSMUST00000195426 1746 ntBASIC8.8□□□□□ -1
VhlP40338 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
VhlP40338 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC8.79□□□□□ -1
VhlP40338 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Gm37567-201ENSMUST00000193241 2279 ntBASIC8.79□□□□□ -1
VhlP40338 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
VhlP40338 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
VhlP40338 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Gm29101-201ENSMUST00000188329 1471 ntBASIC8.79□□□□□ -1
VhlP40338 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
VhlP40338 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Gm11411-201ENSMUST00000117951 719 ntBASIC8.79□□□□□ -1
VhlP40338 Gm9133-201ENSMUST00000118289 540 ntBASIC8.79□□□□□ -1
VhlP40338 Gm16481-201ENSMUST00000119074 1227 ntBASIC8.79□□□□□ -1
VhlP40338 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC8.79□□□□□ -1
VhlP40338 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC8.79□□□□□ -1
VhlP40338 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC8.79□□□□□ -1
VhlP40338 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC8.79□□□□□ -1
VhlP40338 Snord55-201ENSMUST00000174939 79 ntBASIC8.79□□□□□ -1
VhlP40338 Gm7047-201ENSMUST00000196224 1063 ntBASIC8.79□□□□□ -1
VhlP40338 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
VhlP40338 Gm18466-201ENSMUST00000209147 499 ntBASIC8.79□□□□□ -1
VhlP40338 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC8.79□□□□□ -1
VhlP40338 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC8.79□□□□□ -1
VhlP40338 CT025694.1-201ENSMUST00000226188 934 ntBASIC8.79□□□□□ -1
VhlP40338 AC159103.1-201ENSMUST00000228325 429 ntBASIC8.79□□□□□ -1
VhlP40338 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC8.79□□□□□ -1
VhlP40338 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC8.79□□□□□ -1
VhlP40338 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
VhlP40338 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC8.79□□□□□ -1
VhlP40338 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
VhlP40338 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC8.78□□□□□ -1
VhlP40338 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC8.78□□□□□ -1
VhlP40338 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VhlP40338 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VhlP40338 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms