Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm24328-201ENSMUST00000175104 67 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Gm24312-201ENSMUST00000178677 119 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Gm4812-201ENSMUST00000182847 993 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Gm43969-201ENSMUST00000204833 535 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm6390-201ENSMUST00000215034 589 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pde6aP27664 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pde6aP27664 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pde6aP27664 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pde6aP27664 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Spata33-207ENSMUST00000212760 4074 ntBASIC12.45□□□□□ -0.42
Pde6aP27664 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.45□□□□□ -0.42
Pde6aP27664 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6aP27664 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6aP27664 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pde6aP27664 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6aP27664 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pde6aP27664 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6aP27664 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm16547-201ENSMUST00000159474 293 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm22877-201ENSMUST00000175451 105 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm42430-201ENSMUST00000197209 616 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm43506-201ENSMUST00000200675 753 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 Gm43811-201ENSMUST00000202862 695 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Pde6aP27664 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6aP27664 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.44□□□□□ -0.42
Pde6aP27664 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.44□□□□□ -0.42
Pde6aP27664 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.44□□□□□ -0.42
Pde6aP27664 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6aP27664 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6aP27664 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.43□□□□□ -0.42
Pde6aP27664 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pde6aP27664 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6aP27664 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6aP27664 Gm22937-201ENSMUST00000103954 131 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms