Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.11□□□□□ -0.63
Nfkb1P25799 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.11□□□□□ -0.63
Nfkb1P25799 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC11.11□□□□□ -0.63
Nfkb1P25799 Gm36991-201ENSMUST00000191800 648 ntBASIC11.11□□□□□ -0.63
Nfkb1P25799 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.11□□□□□ -0.63
Nfkb1P25799 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.11□□□□□ -0.63
Nfkb1P25799 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.11□□□□□ -0.63
Nfkb1P25799 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.11□□□□□ -0.63
Nfkb1P25799 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nfkb1P25799 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nfkb1P25799 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm19680-201ENSMUST00000095050 1513 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm23745-201ENSMUST00000104230 125 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm16459-201ENSMUST00000121443 686 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm25545-201ENSMUST00000122673 323 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm7255-201ENSMUST00000187371 908 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 BC080696-201ENSMUST00000202858 1218 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm8162-201ENSMUST00000213951 665 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm8170-201ENSMUST00000218581 945 ntBASIC11.1□□□□□ -0.63
Nfkb1P25799 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nfkb1P25799 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nfkb1P25799 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm5764-201ENSMUST00000118817 885 ntBASIC11.09□□□□□ -0.63
Nfkb1P25799 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms