Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm12419-201ENSMUST00000116649 636 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.33□□□□□ -0.92
UbbP0CG49 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
UbbP0CG49 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm18367-201ENSMUST00000176139 600 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm45186-201ENSMUST00000206874 478 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Gm1821-202ENSMUST00000227415 750 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
UbbP0CG49 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Slc24a1-201ENSMUST00000037798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.33□□□□□ -0.92
UbbP0CG49 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
UbbP0CG49 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
UbbP0CG49 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.32□□□□□ -0.92
UbbP0CG49 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
UbbP0CG49 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm45191-201ENSMUST00000205846 5439 ntBASIC9.32□□□□□ -0.92
UbbP0CG49 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
UbbP0CG49 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
UbbP0CG49 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
UbbP0CG49 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.32□□□□□ -0.92
UbbP0CG49 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm2260-201ENSMUST00000184965 657 ntBASIC9.32□□□□□ -0.92
UbbP0CG49 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
UbbP0CG49 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm44315-201ENSMUST00000203041 219 ntBASIC9.32□□□□□ -0.92
UbbP0CG49 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.32□□□□□ -0.92
UbbP0CG49 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.32□□□□□ -0.92
UbbP0CG49 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm23105-201ENSMUST00000083719 134 ntBASIC9.32□□□□□ -0.92
UbbP0CG49 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
UbbP0CG49 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
UbbP0CG49 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
UbbP0CG49 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Cdh18-207ENSMUST00000226693 2165 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.31□□□□□ -0.92
UbbP0CG49 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
UbbP0CG49 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
UbbP0CG49 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.31□□□□□ -0.92
UbbP0CG49 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
UbbP0CG49 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
UbbP0CG49 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms