Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
IghmP01872 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
IghmP01872 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
IghmP01872 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
IghmP01872 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
IghmP01872 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.02□□□□□ -0.8
IghmP01872 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
IghmP01872 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
IghmP01872 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
IghmP01872 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
IghmP01872 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.02□□□□□ -0.81
IghmP01872 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
IghmP01872 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
IghmP01872 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC10.02□□□□□ -0.81
IghmP01872 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC10.02□□□□□ -0.81
IghmP01872 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.02□□□□□ -0.81
IghmP01872 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Mir7076-201ENSMUST00000183519 74 ntBASIC10.02□□□□□ -0.81
IghmP01872 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.02□□□□□ -0.81
IghmP01872 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
IghmP01872 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
IghmP01872 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.02□□□□□ -0.81
IghmP01872 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.02□□□□□ -0.81
IghmP01872 AC125351.1-201ENSMUST00000221438 2223 ntBASIC10.02□□□□□ -0.81
IghmP01872 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
IghmP01872 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
IghmP01872 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
IghmP01872 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.01□□□□□ -0.81
IghmP01872 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 AC117648.1-201ENSMUST00000219777 2510 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.01□□□□□ -0.81
IghmP01872 Gm15285-201ENSMUST00000119271 473 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm1848-201ENSMUST00000120711 789 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm12791-201ENSMUST00000120788 655 ntBASIC10.01□□□□□ -0.81
IghmP01872 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Gm24398-201ENSMUST00000157870 109 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm26134-201ENSMUST00000178484 110 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm37390-201ENSMUST00000192452 872 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm17877-201ENSMUST00000192578 814 ntBASIC10.01□□□□□ -0.81
IghmP01872 Gm5881-201ENSMUST00000204737 367 ntBASIC10.01□□□□□ -0.81
IghmP01872 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC10.01□□□□□ -0.81
IghmP01872 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.01□□□□□ -0.81
IghmP01872 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
IghmP01872 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.01□□□□□ -0.81
IghmP01872 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
IghmP01872 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
IghmP01872 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
IghmP01872 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
IghmP01872 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
IghmP01872 Gm44056-201ENSMUST00000204623 1427 ntBASIC10□□□□□ -0.81
IghmP01872 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
IghmP01872 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms