Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Gm12950-201ENSMUST00000121683 417 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Gm12453-201ENSMUST00000121981 331 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Gm22344-201ENSMUST00000122642 278 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm20414-201ENSMUST00000172918 646 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Gm9574-201ENSMUST00000173127 845 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Gm37301-201ENSMUST00000195412 568 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Gm5870-201ENSMUST00000196461 282 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.4□□□□□ -0.58
Itgb3O54890 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Itgb3O54890 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Itgb3O54890 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Itgb3O54890 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Itgb3O54890 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Itgb3O54890 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Itgb3O54890 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Itgb3O54890 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Itgb3O54890 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Itgb3O54890 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Itgb3O54890 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Itgb3O54890 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.4□□□□□ -0.59
Itgb3O54890 Gm37697-201ENSMUST00000195680 1844 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Itgb3O54890 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm5257-201ENSMUST00000121823 790 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm16441-201ENSMUST00000138176 924 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm6038-201ENSMUST00000154310 948 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.39□□□□□ -0.59
Itgb3O54890 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm4862-201ENSMUST00000170405 438 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Itgb3O54890 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm25677-201ENSMUST00000174983 72 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Gm42710-201ENSMUST00000200608 985 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Gm26782-203ENSMUST00000227103 751 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Itgb3O54890 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.39□□□□□ -0.59
Itgb3O54890 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Itgb3O54890 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms