Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Gm42587-201ENSMUST00000198462 1981 ntBASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.35□□□□□ -0.75
Upk3aQ9JKX8 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm5543-201ENSMUST00000193329 1091 ntBASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm5298-201ENSMUST00000201122 892 ntBASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Upk3aQ9JKX8 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm22937-201ENSMUST00000103954 131 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm26208-201ENSMUST00000158677 124 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm37242-201ENSMUST00000191873 2085 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.33□□□□□ -0.76
Upk3aQ9JKX8 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Upk3aQ9JKX8 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms