Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm14219-201ENSMUST00000120414 288 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm12628-201ENSMUST00000122193 382 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm16397-201ENSMUST00000122201 494 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm8194-201ENSMUST00000159783 859 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm33080-201ENSMUST00000205429 172 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm25125-201ENSMUST00000083340 136 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chmp2aQ9DB34 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm13019-201ENSMUST00000120000 276 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm13445-201ENSMUST00000121664 307 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Mir6958-201ENSMUST00000184207 73 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm9487-201ENSMUST00000216600 472 ntBASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chmp2aQ9DB34 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms