Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm23771-201ENSMUST00000178702 110 ntBASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Mir6979-201ENSMUST00000183927 56 ntBASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm44100-201ENSMUST00000204329 436 ntBASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Gm37304-201ENSMUST00000193833 2886 ntBASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gtf3c6Q9D8P7 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Zswim3-201ENSMUST00000052107 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm11246-201ENSMUST00000120880 345 ntBASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm7985-201ENSMUST00000183329 981 ntBASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Gm10824-201ENSMUST00000220000 2198 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gtf3c6Q9D8P7 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Gm45191-201ENSMUST00000205846 5439 ntBASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gtf3c6Q9D8P7 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms