Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC14.14□□□□□ -0.15
U2af1Q9D883 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
U2af1Q9D883 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
U2af1Q9D883 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
U2af1Q9D883 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
U2af1Q9D883 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
U2af1Q9D883 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
U2af1Q9D883 AA474408-201ENSMUST00000098110 3339 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC14.13□□□□□ -0.15
U2af1Q9D883 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC14.13□□□□□ -0.15
U2af1Q9D883 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm26684-202ENSMUST00000228229 8257 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm12912-201ENSMUST00000121596 1381 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
U2af1Q9D883 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm12453-201ENSMUST00000121981 331 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm25569-201ENSMUST00000157175 131 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm8451-201ENSMUST00000170338 447 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm25677-201ENSMUST00000174983 72 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm38321-201ENSMUST00000195053 235 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 AC154436.1-201ENSMUST00000227272 782 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm5453-201ENSMUST00000080866 447 ntBASIC14.13□□□□□ -0.15
U2af1Q9D883 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
U2af1Q9D883 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.13□□□□□ -0.15
U2af1Q9D883 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.13□□□□□ -0.15
U2af1Q9D883 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
U2af1Q9D883 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm37160-201ENSMUST00000193081 1689 ntBASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm16441-201ENSMUST00000138176 924 ntBASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm6038-201ENSMUST00000154310 948 ntBASIC14.12□□□□□ -0.15
U2af1Q9D883 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm5870-201ENSMUST00000196461 282 ntBASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 AC137871.1-201ENSMUST00000228278 475 ntBASIC14.12□□□□□ -0.15
U2af1Q9D883 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
U2af1Q9D883 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
U2af1Q9D883 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
U2af1Q9D883 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms