Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.45□□□□□ -0.58
Clp1Q99LI9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clp1Q99LI9 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm11540-201ENSMUST00000117457 780 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm8185-201ENSMUST00000160999 669 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm44683-201ENSMUST00000209088 484 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm45878-201ENSMUST00000211839 241 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm2716-201ENSMUST00000212350 643 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.44□□□□□ -0.58
Clp1Q99LI9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clp1Q99LI9 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm7961-201ENSMUST00000201338 1436 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm14571-201ENSMUST00000118292 570 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm11544-201ENSMUST00000120215 382 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.43□□□□□ -0.58
Clp1Q99LI9 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Clp1Q99LI9 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms