Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm15432-201ENSMUST00000121106 195 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm10051-201ENSMUST00000145209 414 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm8197-202ENSMUST00000193422 934 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm43378-201ENSMUST00000199336 582 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm42997-202ENSMUST00000200321 985 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm10263-201ENSMUST00000085163 300 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim60Q8VI40 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm16166-201ENSMUST00000118291 787 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm11952-201ENSMUST00000121172 821 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm27953-201ENSMUST00000185171 143 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Id2-203ENSMUST00000222667 958 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm7967-202ENSMUST00000191042 5042 ntBASIC11.1□□□□□ -0.63
Trim60Q8VI40 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trim60Q8VI40 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.09□□□□□ -0.63
Trim60Q8VI40 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim60Q8VI40 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim60Q8VI40 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim60Q8VI40 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim60Q8VI40 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trim60Q8VI40 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim60Q8VI40 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trim60Q8VI40 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms